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Andrews, N. J.; Farrington, C. P.; Ward, H. T. J.; Cousens, S. N.; Smith, P. G.; Molesworth, A. M.; Knight, R. S. G.; Ironside, J. W. and Will, R. G. (2003). Deaths from variant Creutzfeldt-Jakob disease in the UK. The Lancet, 361(9359) pp. 751–752.

Andrews, N.; Miller, E.; Waight, P.; Farrington, P.; Crowcroft, N.; Stowe, J. and Taylor, B. (2001). Does oral polio vaccine cause intussusception in infants? Evidence from a sequence of three self-controlled case series studies in the United Kingdom. European Journal of Epidemiology, 17(8) pp. 701–706.

Andrews, N.; Pebody, R. G; Berbers, G.; Blondeau, C.; Crovari, P.; Davidkin, I.; Farrington, P.; Fievet-Groyne, F.; Gabutti, G.; Gerike, E.; Giordano, C; Hesketh, L.; Marzec, T.; Morgan-Capner, P.; Osborne, K.; Pleisner, A. M.; Raux, M.; Tischer, A.; Ruden, U.; Valle, M. and Miller, E. (2000). The European Sero-Epidemiology Network: standardizing the enzyme immunoassay results for measles, mumps and rubella. Epidemiology and Infection, 125(1) pp. 127–143.

Andrews, N. J.; Farrington, C. P.; Cousens, S. N.; Smith, P. G.; Ward, H.; Knight, R. S. G.; Ironside, J. W. and Will, R. G. (2000). Incidence of variant Creutzfeldt-Jakob disease in the UK. The Lancet, 356(9228) pp. 481–482.

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Botton, Jérémie; Jabagi, Marie Joelle; Bertrand, Marion; Baricault, Bérangère; Drouin, Jérôme; Le Vu, Stéphane; Weill, Alain; Farrington, Paddy; Zureik, Mahmoud and Dray-Spira, Rosemary (2022). Risk for Myocardial Infarction, Stroke, and Pulmonary Embolism Following COVID-19 Vaccines in Adults Younger Than 75 Years in France. Annals of Internal Medicine, 175(9) pp. 1250–1257.

Bertie, Andrew and Farrington, Paddy (2003). Teaching confidence intervals with Java applets. Teaching Statistics, 25(3) pp. 70–74.

Brugha, Ruairí; Heptonstall, Julia; Farrington, Paddy; Andren, Sheila; Perry, Keith and Parry, John (1998). Risk of hepatitus A infection in sewerage workers. Occupational and Environmental Medicine, 55(8) pp. 567–569.

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De Serres, Gaston; Gay, Nigel J. and Farrington, C. Paddy (2000). The epidemiology of transmissible diseases after elimination. American Journal of Epidemiology, 151(11) pp. 1039–1048.

Dourado, Inês; Cunha, Sérgio; Teixeira, Maria de Gloria; Farrington, C. Paddy; Melo, Ailton; Lucena, Rita and Barreto, Mauricio L. (2000). An outbreak of aseptic meningitis associated with mass vaccination with a Urabe-containing measles-mumps-rubella vaccine: implications for immunization programs. American Journal of Epidemiology, 151(5) pp. 524–530.

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Enki, Doyo Gragn; Noufaily, Angela; Farrington, Paddy; Garthwaite, Paul; Andrews, Nick and Charlett, Andre (2016). Taylor's power law and the statistical modelling of infectious disease surveillance data. Journal of the Royal Statistical Society: Series A (Statistics in Society), 180(1) pp. 45–72.

Enki, Doyo G.; Noufaily, Angela; Garthwaite, Paul H.; Andrews, Nick J.; Charlett, André; Lane, Chris and Farrington, C. Paddy (2013). Automated biosurveillance data from England and Wales, 1991-2011. Emerging Infectious Diseases, 19(1) pp. 35–42.

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Fonseca‐Rodríguez, Osvaldo; Fors Connolly, Anne‐Marie; Katsoularis, Ioannis; Lindmark, Krister and Farrington, Paddy (2021). Avoiding bias in self‐controlled case series studies of coronavirus disease 2019. Statistics in Medicine, 40(27) pp. 6197–6208.

Farrington, Paddy; Whitaker, Heather and Weldeselassie, Yonas Ghebremichael (2018). Self-Controlled Case Series Studies:A Modelling Guide with R. Chapman & Hall/CRC Press Biostatistics Series. Boca Raton: CRC Press.

Farrington, Paddy; Unkel, Steffen and Anaya-Izquierdo, Karim (2012). The relative frailty variance and shared frailty models. Journal of the Royal Statistical Society: Series B (Statistical Methodology), 74(4) pp. 673–696.

Farrington, Paddy; Anaya Izquierdo, Karim; Whitaker, Heather; Hocine, Mounia; Douglas, Ian and Smeeth, Liam (2011). Self-controlled case series analysis with event-dependent observation periods. Journal of the American Statistical Association, 106(494) pp. 417–426.

Farrington, C. Paddy and Hocine, Mounia N. (2010). Within-individual dependence in self-controlled case series models for recurrent events. Journal of the Royal Statistical Society: Series C (Applied Statistics), 59(3) pp. 457–475.

Farrington, C. P.; Whitaker, H. J.; Wallinga, J. and Manfredi, P. (2009). Measures of disassortativeness and their application to directly transmitted infections. Biometrical Journal, 51(3) pp. 387–407.

Farrington, C. P.; Firth, M. J.; Moulton, L. H.; Ravn, H.; Andersen, P. K. and Evans, S. (2009). Epidemiological studies of the non-specific effects of vaccines: II - methodological issues in the design and analysis of cohort studies. Tropical Medicine and International Health, 14(9) pp. 977–985.

Farrington, C Paddy; Whitaker, Heather and Hocine, Mounia (2007). Statistical issues in vaccine safety evaluation. In: Ruggeri, Fabrizio; Kenett, Ron and Faltin, Frederick W eds. Encyclopedia of Statistics in Quality and Reliability. Hoboken, NJ: Wiley, pp. 1888–1894.

Farrington, C.P. and Whitaker, H.J. (2006). Semiparametric analysis of case series data. Journal of the Royal Statistical Society: Series C (Applied Statistics), 55(5) pp. 553–594.

Farrington, C. Paddy and Whitaker, Heather J. (2005). Contact surface models for infectious diseases: estimation from serologic survey data. Journal of the American Statistical Association, 100(470) pp. 370–379.

Farrington, Paddy (2005). Communicable diseases. In: Armitage, Peter and Coulton, Theodore eds. Encyclopedia of Biostatistics, 2nd Edition, Volume 1. John Wiley and Sons.

Farrington, C. Paddy and Miller, Elizabeth (2005). Informed choice, balance and the MMR saga. The Lancet Infectious Diseases, 5 pp. 2–3.

Folb, Peter I.; Bernatowska, Ewa; Chen, Robert; Clemens, John; Dodoo, Alex N. O.; Ellenberg, Susan S.; Farrington, Paddy; John, T. Jacob; Lambert, Paul-Henri; Macdonald, Noni E; Miller, Elizabeth; Salisbury, David; Schmitt, Heinz-J.; Siegrist, Claire-Anne and Wimalaratne, Omala (2004). A global perspective on vaccine safety and public health: the Global Advisory Committee on Vaccine Safety. American Journal of Public Health, 94(11) pp. 1926–1931.

Farrington, Paddy (2004). Comments on the papers by Griggs and Farewell and Marshall et al. Journal of the Royal Statistical Society: Series B (Statistical Methodology), Series A(167) pp. 562–563.

Farrington, Paddy and Andrews, Nick (2003). Outbreak detection: application to infectious disease surveillance. In: Brookmeyer, Ron and Stroup, Donna F. eds. Monitoring the Health of Populations: Statistical Principles and Methods for Public Health Surveillance. New York, NY, USA: OUP USA, pp. 203–231.

Farrington, C. P. (2003). On vaccine efficacy and reproduction numbers. Mathematical Biosciences, 185(1) pp. 89–109.

Farrington, C. P.; Kanaan, M. N. and Gay, N. J. (2003). Branching process models for surveillance of infectious diseases controlled by mass vaccination. Biostatistics, 4(2) pp. 279–295.

Farrington, Paddy and Miller, Elizabeth (2003). Clinical trials. In: Robinson, Andrew; Hudson, Michael J. and Cranage, Martin P. eds. Vaccine Protocols (Second Edition). Methods in Molecular Medicine: (4). Totowa, New Jersey, USA: Humana Press, pp. 335–351.

Farrington, Paddy and Miller, Elizabeth (2001). Meningococcal vaccine trials. In: Pollard, Andrew J. and Maiden, Martin C. J. eds. Meningococcal Vaccines: Methods and Protocols. Methods in Molecular Biology (66). Totowa, New Jersey, USA: Humana Press, pp. 371–393.

Farrington, C. P. and Miller, E. (2001). Vaccine trials. Molecular Biotechnology, 17(1) pp. 43–58.

Farrington, C.P.; Kanaan, M.N. and Gay, N.J. (2001). Estimation of the basic reproduction number for infectious diseases from age-stratified serological survey data. Journal of the Royal Statistical Society: Series C (Applied Statistics), 50(3) pp. 251–292.

Farrington, C. Paddy; Miller, Elizabeth and Taylor, Brent (2001). MMR and autism: further evidence against a causal association. Vaccine, 19(27) pp. 3632–3635.

Farrington, C. P. (1999). Interval-censoring. In: Kotz, Samuel; Read, Campbell B.; Balakrishnan, N. and Vidakovic, Brani eds. Encyclopedia of Statistical Science Update, Volume 3. John Wiley and Sons, Inc., pp. 371–376.

Farrington, C. P. and Beale, A. D. (1998). The detection of outbreaks of infectious disease. In: Gierl, L.; Cliff, A. D.; Valleron, A. J.; Farrington, Paddy; Bull, M. and Teubner, B. G. eds. GEOMED '97, Proceedings of the International Workshop on Geomedical Systems. Stuttgart, Germany: B. G. Teubner, pp. 97–117.

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Ghebremichael-Weldeselassie, Y; Jabagi, M. J; Botton, J; Bertrand, M; Baricault, B; Drouin, J; Weill, A; Zureik, M; Dray-Spira, R and Farrington, P. (2022). A modified self-controlled case series method for event-dependent exposures and high event-related mortality, with application to COVID-19 vaccine safety. Statistics in Medicine, 41(10) pp. 1735–1750.

Gay, Nigel J.; De Serres, Gaston; Farrington, Paddy; Redd, Susan B. and Papania, Mark J. (2004). Assessment of the status of measles elimination from reported outbreaks: United States, 1997-1999. The Journal of Infectious Diseases, 189(Suppl 1) S36-S42.

Galindo Sardinas, Miguel A.; Zambrano Cardenas, Andrés; Coutin Marie, Gisele; Santin Pena, Manuel; Alino Santiago, Miriam; Valcarcel Sanchez, Marlen and Farrington, C. P. (2001). Lack of association between intussusception and oral polio vaccine in Cuban children. European Journal of Epidemiology, 17(8) pp. 783–787.

Gay, N. J.; Hesketh, L. M.; Osborne, K. P.; Farrington, C. P.; Morgan-Capner, P. and Miller, E. (1999). The prevalence of hepatitus B infection in adults in England and Wales. Epidemiology and Infection, 122(1) pp. 133–138.

Gierl, Lother; Cliff, A. D.; Valleron, A. J.; Farrington, Paddy and Bull, M. (1998). GEOMED '97. Stuttgart, Germany: B.G. Teubner.

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Hocine, Mounia N.; Musonda, Patrick; Andrews, Nick J. and Farrington, Paddy (2009). Sequential case series analysis for pharmacovigilance. Journal of the Royal Statistical Society: Series A (Statistics in Society), 172(1) pp. 213–236.

Hocine, Mounia; Whitaker, Heather and Farrington, Paddy (2007). Case series analysis. In: Ruggeri, Fabrizio; Kenett, Ron and Faltin, Frederick W. eds. Encyclopedia of Statistics in Quality and Reliability. Chichester: Wiley, pp. 1783–1788.

Hubbard, R.; Lewis, S.; Smith, C.; Godfrey, C.; Smeeth, L.; Farrington, P. and Britton, J. (2005). Use of nicotine replacement therapy and the risk of acute myocardial infarction, stroke, and death. Tobacco Control, 14(6) pp. 416–421.

Hubbard, R.; Lewis, S.; West, J.; Smith, C.; Godfrey, C.; Smeeth, L.; Farrington, P. and Britton, J. (2005). Bupropion and the risk of sudden death: a self-controlled case-series analysis using The Health Improvement Network. Thorax, 60(10) pp. 848–850.

Hubbard, Richard; Farrington, Paddy; Smith, Chris; Smeeth, Liam and Tattersfield, Anne (2003). Exposure to tricyclic and selective serotonin reuptake inhibitor antidepressants and the risk of hip fracture. American Journal of Epidemiology, 158(1) pp. 77–84.

Hawker, Jeremy I.; Bakshi, Surinder S.; Ali, Shaukat and Farrington, C. Paddy (1999). Ecological analysis of ethnic differences in relation between tuberculosis and poverty. British Medical Journal, 319(7216) pp. 1031–1034.

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Jabagi, Marie Joelle; Botton, Jérémie; Bertrand, Marion; Weill, Alain; Farrington, Paddy; Zureik, Mahmoud and Dray-Spira, Rosemary (2022). Myocardial Infarction, Stroke, and Pulmonary Embolism After BNT162b2 mRNA COVID-19 Vaccine in People Aged 75 Years or Older. JAMA, 327(1) pp. 80–82.

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Katsoularis, Ioannis; Fonseca-Rodríguez, Osvaldo; Farrington, Paddy; Jerndal, Hanna; Lundevaller, Erling Häggström; Sund, Malin; Lindmark, Krister and Fors Connolly, Anne-Marie (2022). Risks of deep vein thrombosis, pulmonary embolism, and bleeding after covid-19: nationwide self-controlled cases series and matched cohort study. BMJ, 377, article no. e069590.

Katsoularis, Ioannis; Fonseca-Rodríguez, Osvaldo; Farrington, Paddy; Lindmark, Krister and Fors Connolly, Anne-Marie (2021). Risk of acute myocardial infarction and ischaemic stroke following COVID-19 in Sweden: a self-controlled case series and matched cohort study. The Lancet, 398(10300) pp. 599–607.

Kafatos, G.; Andrews, N.; McConway, K.; Anastassopoulou, C.; Barbara, C.; De Ory, F.; Johansen, K.; Mossong, J.; Prosenc, K.; Vranckx, R.; Nardone, A.; Pebody, R. and Farrington, P. (2015). Estimating seroprevalence of vaccine-preventable infections: is it worth standardizing the serological outcomes to adjust for different assays and laboratories? Epidemiology and Infection, 143(11) pp. 2269–2278.

Kafatos, George; Andrews, Nick; McConway, Kevin J. and Farrington, Paddy (2013). Regression models for censored serological data. Journal of Medical Microbiology, 62(1) pp. 93–100.

Kuhnert, Ronny; Hecker, Hartmut; Poethko-Müller, Christina; Schlaud, Martin; Venneman, Mechtild; Whitaker, Heather J. and Farrington, C. Paddy (2011). A modified self-controlled case series method to examine association between multidose vaccinations and death. Statistics in Medicine, 30(6) pp. 666–677.

Kanaan, M.N. and Farrington, C.P. (2005). Matrix models for childhood infections: a Bayesian approach with applications to rubella and mumps. Epidemiology and Infection, 133(6) pp. 1009–1021.

Kanaan, M.N. and Farrington, C. P. (2002). Estimation of waning vaccine efficacy. Journal of the American Statistical Association, 97(458) pp. 389–397.

Kudesia, G.; Partridge, S.; Farrington, C. P. and Soltanpoor, N. (2002). Changes in age-related seroprevalence of antibody to varicella-zoster virus: impact on vaccine strategy. Journal of Clinical Pathology, 55(2) pp. 154–155.

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Liu, Erin Y.; Smith, Leah M.; Ellis, Anne K.; Whitaker, Heather; Law, Barbara; Kwong, Jeffrey C.; Farrington, Paddy and Lévesque, Linda E. (2018). Quadrivalent human papillomavirus vaccination in girls and the risk of autoimmune disorders: the Ontario Grade 8 HPV Vaccine Cohort Study. CMAJ, 190(21) E648-E655.

Laurichesse, Henri A. A.; Mortimer, Janet; Evans, Barry G. and Farrington, C. Paddy (1998). Pre-AIDS mortality in HIV-infected individuals in England, Wales and Northern Ireland, 1982-1996. AIDS, 12(6) pp. 651–658.

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Musonda, Patrick; Hocine, Mounia N.; Andrews, Nick J.; Tubert-Bitter, Pascale and Farrington, Paddy C. (2008). Monitoring vaccine safety using case series cumulative sum charts. Vaccine, 26(42) pp. 5358–5367.

Miller, E.; Waight, P; Farrington, C. P.; Andrews, N.; Stowe, J. and Taylor, B. (2001). Idiopathic thrombocytopenic purpura and MMR vaccine. Archives of Disease in Childhood, 84(3) pp. 227–229.

Miller, E.; Waight, P. and Farrington, P. (1998). Safety assessment post-licensure. In: Plotkin, S. A.; Brown, F. and Horaud, F. eds. Preclinical and Clinical Development of New Vaccines. Developments in Biologicals (95). Karger, pp. 235–243.

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Nie, Xiaolu; Xu, Lu; Bai, Yi; Liu, Zuoxiang; Liu, Zhike; Farrington, Paddy and Zhan, Siyan (2022). Self-controlled case series design in vaccine safety: a systematic review. Expert Review of Vaccines, 21(3) pp. 313–324.

Noufaily, Angela; Ghebremichael-Weldeselassie, Yonas; Enki, Doyo; Garthwaite, Paul; Andrews, Nick; Charlett, André and Farrington, Paddy (2014). Modelling reporting delays for outbreak detection in infectious disease data. Journal of the Royal Statistical Society: Series A (Statistics in Society), 178(1) pp. 205–222.

Noufaily, Angela; Enki, Doyo G.; Farrington, Paddy; Garthwaite, Paul; Andrews, Nick and Charlett, André (2013). An improved algorithm for outbreak detection in multiple surveillance systems. Statistics in Medicine, 32(7) pp. 1206–1222.

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Pariente, Antoine; Fourrier-Réglat, Annie; Ducruet, Thierry; Farrington, Paddy; Béland, Sarah-Gabrielle; Dartigues, Jean-François; Moore, Nicholas and Moride, Yola (2012). Antipsychotic use and myocardial infarction in older patients with treated dementia. Archives of Internal Medicine, 172(8) pp. 648–653.

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Smeeth, Liam; Thomas, Sara L.; Hall, Andrew J.; Hubbard, Richard; Farrington, Paddy and Vallance, Patrick (2004). Risk of myocardial infarction and stroke after acute infection or vaccination. New England Journal of Medicine, 351(25) pp. 2611–2618.

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Tata, L. J.; Fortun, P. J.; Hubbard, R. B.; Smeeth, L.; Hawkey, C. J.; Smith, C. J. P.; Whitaker, H. J.; Farrington, C. P.; Card, T. R. and West, J. (2005). Does concurrent prescription of selective serotonin reuptake inhibitors and non-steroidal anti-inflammatory drugs substantially increase the risk of upper gastrointestinal bleeding? Alimentary Pharmacology & Therapeutics, 22(3) pp. 175–181.

Taylor, Brent; Miller, Elizabeth and Farrington, Paddy (2000). Autism and measles, mumps and rubella vaccine. The Lancet.

Taylor, Brent; Miller, Elizabeth; Farrington, C. Paddy; Petropoulos, Maria Christina; Favot-Mayaud, Isabelle; Li, Jun and Waight, Pauline A. (1999). Autism and measles, mumps and rubella vaccine: no epidemiological evidence for a causal association. The Lancet, 353(9169) pp. 2026–2029.

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Unkel, Steffen; Farrington, Paddy; Garthwaite, Paul; Robertson, Chris and Andrews, Nick (2012). Statistical methods for the prospective detection of infectious disease outbreaks: a review. Journal of the Royal Statistical Society: Series A (Statistics in Society), 175(1) pp. 49–82.

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Vines, S.K. and Farrington, C.P. (2001). Within-subject exposure dependency in case-crossover studies. Statistics in Medicine, 20(20) pp. 3039–3049.

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Whitaker, Heather J.; Farrington, C. Paddy; Spiessens, Bart and Musonda, Patrick (2006). Tutorial in biostatistics: The self-controlled case series method. Statistics in Medicine, 25(10) pp. 1768–1797.

Webster, George J. M.; Hallett, Rachel; Whalley, Simon A.; Meltzer, Margie; Balogun, Koye; Brown, Dave; Farrington, Conor P.; Sharma, Sukhdev; Hamilton, Gervase; Farrow, Stephen C.; Ramsay, Mary E.; Teo, Chong-Gee and Dusheiko, Geoffrey M. (2000). The molecular epidemiology of a large outbreak of hepatitis B linked to autohaemotherapy. The Lancet, 356(9227) pp. 379–384.

Will, R. G.; Cousens, S. N.; Farrington, C. P.; Smith, P. G.; Knight, R. S. G. and Ironside, J. W. (1999). Deaths from variant Creutzfeldt-Jakob disease. The Lancet, 353(9157) p. 979.

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Xu, Stanley; Sy, Lina S; Hong, Vennis; Farrington, Paddy; Glenn, Sungching C; Ryan, Denison S; Shirley, Abraelle M; Lewin, Bruno J; Tseng, Hung-Fu; Vazquez-Benitez, Gabriela; Glanz, Jason M; Fireman, Bruce; McClure, David L; Hurley, Laura P; Yu, Onchee; Wernecke, Michael; Smith, Ning; Weintraub, Eric S and Qian, Lei (2024). Mortality risk after COVID-19 vaccination: A self-controlled case series study. Vaccine, 42(7) pp. 1731–1737.

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Zaaijer, H. L.; Koppelman, M. H. G. M. and Farrington, C. P. (2004). Parvovirus B19 viraemia in Dutch blood donors. Epidemiology and Infection, 132(6) pp. 1161–1166.

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